Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l36p | SAMN05444679_106245 | Not Available | Positive | 2094976 - 2095089 | 4294.47 |
| ssu ribosomal protein s13p | SAMN05444679_106246 | Not Available | Positive | 2095114 - 2095479 | 13801.1 |
| ssu ribosomal protein s11p | SAMN05444679_106247 | Not Available | Positive | 2095492 - 2095896 | 14128.9 |
| ssu ribosomal protein s4p | SAMN05444679_106248 | Not Available | Positive | 2096031 - 2096654 | 23481.1 |
| dna-directed rna polymerase subunit alpha | SAMN05444679_106249 | Not Available | Positive | 2096784 - 2097773 | 36146.5 |
| lsu ribosomal protein l17p | SAMN05444679_106250 | Not Available | Positive | 2097851 - 2098252 | 15085.5 |
| Trna-met | Not Available | Not Available | Positive | 2098271 - 2098347 | Not Available |
| hypothetical protein | SAMN05444679_106252 | Not Available | Positive | 2098651 - 2099061 | 14758.4 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_106253 | Not Available | Negative | 2099088 - 2099483 | 14495.4 |
| 2-aminobenzoate-coa ligase | SAMN05444679_106254 | Not Available | Negative | 2099480 - 2101096 | 58067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
