Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l5p | SAMN05444679_106235 | Not Available | Positive | 2089982 - 2090521 | 20070.6 |
| ssu ribosomal protein s14p | SAMN05444679_106236 | Not Available | Positive | 2090530 - 2090835 | 11296.8 |
| ssu ribosomal protein s8p | SAMN05444679_106237 | Not Available | Positive | 2090856 - 2091251 | 14060.3 |
| large subunit ribosomal protein l6 | SAMN05444679_106238 | Not Available | Positive | 2091276 - 2091809 | 18837.1 |
| lsu ribosomal protein l18p | SAMN05444679_106239 | Not Available | Positive | 2091821 - 2092189 | 12882.6 |
| ssu ribosomal protein s5p | SAMN05444679_106240 | Not Available | Positive | 2092208 - 2092726 | 18030.1 |
| lsu ribosomal protein l30p | SAMN05444679_106241 | Not Available | Positive | 2092741 - 2092926 | 6762.44 |
| lsu ribosomal protein l15p | SAMN05444679_106242 | Not Available | Positive | 2092951 - 2093382 | 14651.1 |
| protein translocase subunit secy/sec61 alpha | SAMN05444679_106243 | Not Available | Positive | 2093403 - 2094713 | 47620.4 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05444679_106244 | Not Available | Positive | 2094723 - 2094941 | 8263.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
