Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN05444679_106215 | Not Available | Positive | 2069253 - 2071214 | 70994.1 |
| pap2 superfamily protein | SAMN05444679_106216 | Not Available | Positive | 2071214 - 2071867 | 23886.4 |
| hypothetical protein | SAMN05444679_106217 | Not Available | Positive | 2071971 - 2072456 | 17898.7 |
| hypothetical protein | SAMN05444679_106218 | Not Available | Positive | 2072453 - 2072950 | 16341.2 |
| hypothetical protein | SAMN05444679_106219 | Not Available | Positive | 2072947 - 2073831 | 32243.9 |
| fad/fmn-containing dehydrogenase | SAMN05444679_106220 | Not Available | Positive | 2073828 - 2075261 | 53533.3 |
| hypothetical protein | SAMN05444679_106221 | Not Available | Positive | 2075283 - 2076368 | 40298.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_106222 | Not Available | Negative | 2076341 - 2077111 | 27206.5 |
| aldose 1-epimerase | SAMN05444679_106223 | Not Available | Positive | 2077231 - 2078148 | 33184.4 |
| hypothetical protein | SAMN05444679_106224 | Not Available | Positive | 2078243 - 2078632 | 13757.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
