Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444679_106192 | Not Available | Positive | 2048482 - 2050230 | 62963.8 |
| hypothetical protein | SAMN05444679_106193 | Not Available | Positive | 2050227 - 2050457 | 8139.65 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_106194 | Not Available | Positive | 2050499 - 2051473 | 34394.8 |
| hypothetical protein | SAMN05444679_106195 | Not Available | Positive | 2051511 - 2051756 | 8517.09 |
| antitoxin component ywqk of the ywqjk toxin-antitoxin module | SAMN05444679_106196 | Not Available | Negative | 2051645 - 2052805 | 43232.7 |
| hypothetical protein | SAMN05444679_106197 | Not Available | Negative | 2052828 - 2053280 | 16979.3 |
| cystathionine gamma-synthase | SAMN05444679_106198 | Not Available | Positive | 2053294 - 2054544 | 43797.7 |
| hypothetical protein | SAMN05444679_106199 | Not Available | Positive | 2054600 - 2055604 | 35900.4 |
| protein of unknown function | SAMN05444679_106200 | Not Available | Positive | 2055634 - 2055990 | 11962.8 |
| iron complex outermembrane recepter protein | SAMN05444679_106201 | Not Available | Positive | 2056069 - 2058381 | 83884.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
