Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase | SAMN05444679_106182 | Not Available | Negative | 2038640 - 2040115 | 52370.9 |
| formyltetrahydrofolate deformylase | SAMN05444679_106183 | Not Available | Negative | 2040129 - 2040974 | 31339.4 |
| beta-alanine--pyruvate transaminase | SAMN05444679_106184 | Not Available | Positive | 2041066 - 2042400 | 48434.4 |
| uncharacterized iron-regulated protein | SAMN05444679_106185 | Not Available | Negative | 2042384 - 2043199 | 28669.8 |
| hypothetical protein | SAMN05444679_106186 | Not Available | Positive | 2043211 - 2044335 | 39560.7 |
| protein of unknown function | SAMN05444679_106187 | Not Available | Negative | 2044329 - 2044640 | 11419.4 |
| protein of unknown function | SAMN05444679_106188 | Not Available | Negative | 2044729 - 2045844 | 38894.6 |
| fumarylacetoacetate (faa) hydrolase | SAMN05444679_106189 | Not Available | Positive | 2045943 - 2046965 | 36727.5 |
| fic/doc family protein | SAMN05444679_106190 | Not Available | Negative | 2047078 - 2047506 | 16659.1 |
| transcriptional regulator, luxr family | SAMN05444679_106191 | Not Available | Negative | 2047610 - 2048407 | 28759.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
