Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN05444679_106172 | Not Available | Positive | 2024971 - 2025363 | 14335.5 |
| cytochrome p450 / nadph-cytochrome p450 reductase | SAMN05444679_106173 | Not Available | Negative | 2025375 - 2028593 | 118911.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_106174 | Not Available | Negative | 2028692 - 2029942 | 44656.5 |
| transcriptional regulator, tetr family | SAMN05444679_106175 | Not Available | Negative | 2029973 - 2030629 | 24971.7 |
| long-chain acyl-coa synthetase | SAMN05444679_106176 | Not Available | Positive | 2030704 - 2032323 | 58329.2 |
| acetyl/propionyl-coa carboxylase, alpha subunit | SAMN05444679_106177 | Not Available | Positive | 2032323 - 2035619 | 115788.0 |
| lysophospholipase l1 | SAMN05444679_106178 | Not Available | Positive | 2035684 - 2036964 | 44788.8 |
| yxwgxw repeat-containing protein | SAMN05444679_106179 | Not Available | Positive | 2037085 - 2037501 | 15852.5 |
| putative effector of murein hydrolase | SAMN05444679_106180 | Not Available | Negative | 2037543 - 2038268 | 24730.8 |
| putative effector of murein hydrolase lrga, upf0299 family | SAMN05444679_106181 | Not Available | Negative | 2038272 - 2038622 | 12469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
