Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate transport system substrate-binding protein | SAMN05444679_106162 | Not Available | Negative | 2016071 - 2016934 | 30688.8 |
| ergothioneine biosynthesis protein egtb | SAMN05444679_106163 | Not Available | Negative | 2016967 - 2018142 | 43898.0 |
| putative glycosyltransferase, tigr04348 family | SAMN05444679_106164 | Not Available | Positive | 2018180 - 2019139 | 34581.8 |
| selenophosphate synthase | SAMN05444679_106165 | Not Available | Positive | 2019165 - 2020226 | 36421.2 |
| diacylglycerol o-acyltransferase | SAMN05444679_106166 | Not Available | Negative | 2020216 - 2021793 | 56816.1 |
| hypothetical protein | SAMN05444679_106167 | Not Available | Positive | 2021999 - 2022550 | 19161.2 |
| hypothetical protein | SAMN05444679_106168 | Not Available | Positive | 2022599 - 2023054 | 16435.1 |
| transcriptional regulator, tetr family | SAMN05444679_106169 | Not Available | Positive | 2023082 - 2023717 | 23772.5 |
| alpha/beta hydrolase family protein | SAMN05444679_106170 | Not Available | Positive | 2023790 - 2024563 | 27670.2 |
| predicted lactoylglutathione lyase | SAMN05444679_106171 | Not Available | Positive | 2024586 - 2024957 | 13225.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
