Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative efflux protein, mate family | SAMN05444679_101188 | Not Available | Positive | 167574 - 168977 | 48467.5 |
| short-chain dehydrogenase | SAMN05444679_101189 | Not Available | Positive | 169006 - 169707 | 24032.5 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_101190 | Not Available | Negative | 169689 - 170453 | 27688.2 |
| 2-keto-3-deoxy-phosphogalactonate aldolase | SAMN05444679_101191 | Not Available | Negative | 170462 - 171103 | 21667.5 |
| 2-keto-3-deoxygalactonate kinase | SAMN05444679_101192 | Not Available | Negative | 171100 - 171996 | 31775.2 |
| dehydratase family protein | SAMN05444679_101193 | Not Available | Negative | 171997 - 173301 | 47615.9 |
| lactate dehydrogenase | SAMN05444679_101194 | Not Available | Positive | 173504 - 174451 | 33430.5 |
| transcriptional regulator, gntr family | SAMN05444679_101195 | Not Available | Positive | 174469 - 175212 | 27126.0 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444679_101196 | Not Available | Positive | 175283 - 176659 | 50702.1 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444679_101197 | Not Available | Positive | 176752 - 177621 | 32602.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
