Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05444679_106152 | Not Available | Negative | 2006069 - 2006512 | 16668.4 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN05444679_106153 | Not Available | Positive | 2006642 - 2009605 | 105549.0 |
| glutamate dehydrogenase (nad(p)+) | SAMN05444679_106154 | Not Available | Positive | 2009691 - 2010962 | 45882.3 |
| phosphoribulokinase / uridine kinase family protein | SAMN05444679_106155 | Not Available | Positive | 2010959 - 2011576 | 22829.3 |
| hypothetical protein | SAMN05444679_106156 | Not Available | Positive | 2011681 - 2012301 | 21992.1 |
| hypothetical protein | SAMN05444679_106157 | Not Available | Negative | 2012306 - 2012533 | 8361.97 |
| arginase | SAMN05444679_106158 | Not Available | Negative | 2012633 - 2013547 | 32676.1 |
| phosphonate transport system permease protein | SAMN05444679_106159 | Not Available | Negative | 2013570 - 2014379 | 28252.9 |
| phosphonate transport system permease protein | SAMN05444679_106160 | Not Available | Negative | 2014385 - 2015218 | 28783.3 |
| phosphonate transport system atp-binding protein | SAMN05444679_106161 | Not Available | Negative | 2015215 - 2016054 | 29109.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
