Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-sedoheptulose 7-phosphate isomerase | SAMN05444679_106142 | Not Available | Positive | 1996280 - 1996984 | 24320.3 |
| osmotically-inducible protein osmy, contains bon domain | SAMN05444679_106143 | Not Available | Positive | 1996981 - 1997718 | 25527.7 |
| 3-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxopropionate reductase | SAMN05444679_106144 | Not Available | Negative | 1997823 - 1998746 | 32078.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_106145 | Not Available | Negative | 1998780 - 1999769 | 33994.9 |
| amidase | SAMN05444679_106146 | Not Available | Negative | 1999803 - 2001290 | 52803.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_106147 | Not Available | Positive | 2001408 - 2002319 | 33550.8 |
| twitching motility protein pilu | SAMN05444679_106148 | Not Available | Negative | 2002346 - 2003482 | 41869.5 |
| pilus retraction atpase pilt | SAMN05444679_106149 | Not Available | Negative | 2003514 - 2004557 | 38128.1 |
| hypothetical protein | SAMN05444679_106150 | Not Available | Positive | 2004603 - 2005292 | 24469.6 |
| hypothetical protein | SAMN05444679_106151 | Not Available | Negative | 2005285 - 2005980 | 25485.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
