Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-gulonate 5-dehydrogenase | SAMN05444679_106132 | Not Available | Negative | 1985625 - 1986659 | 36959.7 |
| d-mannonate dehydratase | SAMN05444679_106133 | Not Available | Negative | 1986700 - 1987908 | 45193.1 |
| trap transporter, dctm subunit | SAMN05444679_106134 | Not Available | Negative | 1987936 - 1989795 | 65518.7 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_106135 | Not Available | Negative | 1989833 - 1990852 | 36770.1 |
| fructuronate reductase | SAMN05444679_106136 | Not Available | Negative | 1990902 - 1992398 | 53456.0 |
| transcriptional regulator, gntr family | SAMN05444679_106137 | Not Available | Positive | 1992551 - 1993312 | 28058.7 |
| hypothetical protein | SAMN05444679_106138 | Not Available | Negative | 1993434 - 1993655 | 8090.61 |
| glutathione s-transferase | SAMN05444679_106139 | Not Available | Positive | 1994018 - 1994821 | 29510.3 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05444679_106140 | Not Available | Negative | 1994925 - 1995863 | 32620.9 |
| putative endonuclease | SAMN05444679_106141 | Not Available | Positive | 1995904 - 1996260 | 12819.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
