Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN05444679_106122 | Not Available | Negative | 1976929 - 1977633 | 24509.2 |
| alcohol dehydrogenase | SAMN05444679_106123 | Not Available | Negative | 1977757 - 1978758 | 36452.7 |
| uncharacterized conserved protein, duf2147 family | SAMN05444679_106124 | Not Available | Negative | 1978768 - 1979283 | 18439.4 |
| transcriptional regulator, tetr family | SAMN05444679_106125 | Not Available | Negative | 1979322 - 1979786 | 16424.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_106126 | Not Available | Negative | 1979954 - 1980928 | 33831.9 |
| lactate dehydrogenase | SAMN05444679_106127 | Not Available | Negative | 1980978 - 1981931 | 33409.5 |
| citrate synthase | SAMN05444679_106128 | Not Available | Positive | 1982069 - 1983232 | 41130.5 |
| hypothetical protein | SAMN05444679_106129 | Not Available | Negative | 1983229 - 1983459 | 8228.97 |
| tripartite tricarboxylate transporter family receptor | SAMN05444679_106130 | Not Available | Negative | 1983524 - 1983988 | 16734.2 |
| hypothetical protein | SAMN05444679_106131 | Not Available | Negative | 1984348 - 1985238 | 33015.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
