Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_106102 | Not Available | Positive | 1954503 - 1955054 | 20417.3 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444679_106103 | Not Available | Negative | 1955121 - 1955726 | 20662.5 |
| outer membrane protein, multidrug efflux system | SAMN05444679_106104 | Not Available | Negative | 1955819 - 1957237 | 50306.8 |
| multidrug efflux pump | SAMN05444679_106105 | Not Available | Negative | 1957230 - 1960394 | 112488.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444679_106106 | Not Available | Negative | 1960408 - 1961682 | 43448.1 |
| transcriptional regulator, tetr family | SAMN05444679_106107 | Not Available | Positive | 1961829 - 1962485 | 24057.9 |
| Trna-arg | Not Available | Not Available | Positive | 1962528 - 1962599 | Not Available |
| arylsulfatase | SAMN05444679_106109 | Not Available | Negative | 1962603 - 1964609 | 74348.1 |
| transcriptional regulator, tetr family | SAMN05444679_106110 | Not Available | Negative | 1964997 - 1965665 | 24786.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_106111 | Not Available | Positive | 1965897 - 1966865 | 33749.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
