Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_10672 | Not Available | Negative | 1928619 - 1928837 | 7900.26 |
| protein of unknown function | SAMN05444679_10673 | Not Available | Positive | 1929038 - 1929562 | 18504.5 |
| putative mrna 3-end processing factor | SAMN05444679_10674 | Not Available | Positive | 1929633 - 1930700 | 38306.2 |
| dna ligase-1 | SAMN05444679_10675 | Not Available | Positive | 1930697 - 1932367 | 61984.6 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444679_10676 | Not Available | Positive | 1932481 - 1933059 | 20632.2 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN05444679_10677 | Not Available | Negative | 1933063 - 1933590 | 19689.8 |
| uncharacterized protein | SAMN05444679_10678 | Not Available | Negative | 1933593 - 1934522 | 31147.5 |
| lema protein | SAMN05444679_10679 | Not Available | Negative | 1934531 - 1935127 | 22218.4 |
| hypothetical protein | SAMN05444679_10680 | Not Available | Positive | 1935173 - 1935925 | 27086.0 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_10681 | Not Available | Negative | 1935922 - 1936737 | 29699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
