Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subcomplex gamma subunit | SAMN05444679_10662 | Not Available | Positive | 1916719 - 1917594 | 31615.5 |
| atp synthase f1 subcomplex beta subunit | SAMN05444679_10663 | Not Available | Positive | 1917647 - 1919062 | 50677.8 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05444679_10664 | Not Available | Positive | 1919081 - 1919500 | 14791.7 |
| rok family protein (putative glucokinase) | SAMN05444679_10665 | Not Available | Positive | 1919675 - 1920877 | 41876.9 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444679_10666 | Not Available | Positive | 1920874 - 1922391 | 54908.5 |
| ribose transport system permease protein | SAMN05444679_10667 | Not Available | Positive | 1922360 - 1923394 | 35418.3 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444679_10668 | Not Available | Positive | 1923442 - 1924404 | 34795.8 |
| predicted dehydrogenase | SAMN05444679_10669 | Not Available | Positive | 1924410 - 1925573 | 41790.6 |
| hypothetical protein | SAMN05444679_10670 | Not Available | Positive | 1925748 - 1926434 | 25393.8 |
| nad+ synthase (glutamine-hydrolysing) | SAMN05444679_10671 | Not Available | Positive | 1926531 - 1928609 | 76161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
