Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-haloacid dehalogenase | SAMN05444679_101178 | Not Available | Positive | 159675 - 160400 | 26131.3 |
| lactoylglutathione lyase | SAMN05444679_101179 | Not Available | Negative | 160397 - 160789 | 14022.6 |
| glutathione s-transferase | SAMN05444679_101180 | Not Available | Negative | 160851 - 161537 | 25817.0 |
| iron(iii) transport system atp-binding protein | SAMN05444679_101181 | Not Available | Negative | 161620 - 162306 | 24325.5 |
| hypothetical protein | SAMN05444679_101182 | Not Available | Negative | 162303 - 162392 | 2946.32 |
| iron(iii) transport system permease protein | SAMN05444679_101183 | Not Available | Negative | 162389 - 164029 | 57152.5 |
| iron(iii) transport system substrate-binding protein | SAMN05444679_101184 | Not Available | Negative | 164106 - 165140 | 36593.0 |
| uncharacterized domain 1-containing protein | SAMN05444679_101185 | Not Available | Negative | 165263 - 165811 | 19350.6 |
| transcriptional regulator, marr family | SAMN05444679_101186 | Not Available | Positive | 165855 - 166328 | 17263.8 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_101187 | Not Available | Positive | 166321 - 167577 | 42609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
