Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoic acid synthetase | SAMN05444679_10652 | Not Available | Negative | 1909269 - 1910252 | 36716.2 |
| lipoyl(octanoyl) transferase | SAMN05444679_10653 | Not Available | Negative | 1910272 - 1910931 | 23745.3 |
| hypothetical protein | SAMN05444679_10654 | Not Available | Negative | 1910949 - 1911245 | 10652.8 |
| d-alanine transaminase | SAMN05444679_10655 | Not Available | Negative | 1911242 - 1912147 | 32546.1 |
| atp synthase protein i | SAMN05444679_10656 | Not Available | Positive | 1912319 - 1912819 | 18029.4 |
| f-type h+-transporting atpase subunit a | SAMN05444679_10657 | Not Available | Positive | 1912823 - 1913692 | 31684.2 |
| atp synthase f0 subcomplex c subunit | SAMN05444679_10658 | Not Available | Positive | 1913754 - 1914017 | 8982.35 |
| f-type h+-transporting atpase subunit b | SAMN05444679_10659 | Not Available | Positive | 1914098 - 1914568 | 16905.6 |
| atp synthase f1 subcomplex delta subunit | SAMN05444679_10660 | Not Available | Positive | 1914577 - 1915107 | 18325.0 |
| atp synthase f1 subcomplex alpha subunit | SAMN05444679_10661 | Not Available | Positive | 1915144 - 1916697 | 55500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
