Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10642 | Not Available | Positive | 1897284 - 1898261 | 34234.6 |
| fumarase, class ii | SAMN05444679_10643 | Not Available | Positive | 1898267 - 1899682 | 50168.7 |
| transporter, ybir family | SAMN05444679_10644 | Not Available | Negative | 1899669 - 1900757 | 38576.9 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444679_10645 | Not Available | Negative | 1900768 - 1902315 | 55348.3 |
| type iv pilus assembly protein pily1 | SAMN05444679_10646 | Not Available | Negative | 1902418 - 1905726 | 115612.0 |
| hypothetical protein | SAMN05444679_10647 | Not Available | Negative | 1905746 - 1906297 | 18599.0 |
| type iv pilus assembly protein pilw | SAMN05444679_10648 | Not Available | Negative | 1906294 - 1907352 | 37111.5 |
| type iv pilus assembly protein pilv | SAMN05444679_10649 | Not Available | Negative | 1907361 - 1907936 | 19744.8 |
| type iv fimbrial biogenesis protein fimt | SAMN05444679_10650 | Not Available | Negative | 1907970 - 1908452 | 17224.8 |
| type iv pilus assembly protein pile | SAMN05444679_10651 | Not Available | Negative | 1908443 - 1908925 | 17045.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
