Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system permease protein | SAMN05444679_10632 | Not Available | Positive | 1887487 - 1888335 | 30137.3 |
| branched-chain amino acid transport system permease protein | SAMN05444679_10633 | Not Available | Positive | 1888332 - 1889246 | 31891.9 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_10634 | Not Available | Positive | 1889239 - 1889991 | 26656.4 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_10635 | Not Available | Positive | 1889988 - 1890779 | 27528.8 |
| vanillin dehydrogenase | SAMN05444679_10636 | Not Available | Positive | 1890808 - 1892262 | 50003.0 |
| hypothetical protein | SAMN05444679_10637 | Not Available | Positive | 1892351 - 1893394 | 37100.9 |
| eama domain-containing membrane protein rard | SAMN05444679_10638 | Not Available | Negative | 1893401 - 1894246 | 29492.0 |
| transcriptional regulator, arac family | SAMN05444679_10639 | Not Available | Negative | 1894312 - 1895010 | 25200.1 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_10640 | Not Available | Negative | 1895037 - 1895864 | 30811.9 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444679_10641 | Not Available | Positive | 1895878 - 1897239 | 49133.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
