Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444679_10622 | Not Available | Positive | 1878346 - 1879605 | 45118.2 |
| pts system, ascorbate-specific iia component | SAMN05444679_10623 | Not Available | Positive | 1879602 - 1880057 | 16278.7 |
| phosphocarrier protein | SAMN05444679_10624 | Not Available | Positive | 1880026 - 1880295 | 9525.57 |
| phosphotransferase system, enzyme i, ptsi | SAMN05444679_10625 | Not Available | Positive | 1880292 - 1882100 | 66161.0 |
| ltxxq motif family protein | SAMN05444679_10626 | Not Available | Positive | 1882203 - 1882664 | 16863.2 |
| protein of unknown function | SAMN05444679_10627 | Not Available | Positive | 1882657 - 1883127 | 16096.8 |
| two-component system, ompr family, response regulator rpab | SAMN05444679_10628 | Not Available | Positive | 1883141 - 1883881 | 27455.4 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444679_10629 | Not Available | Positive | 1883878 - 1885173 | 47859.3 |
| transcriptional regulator, arac family | SAMN05444679_10630 | Not Available | Negative | 1885148 - 1886104 | 35286.9 |
| branched-chain amino acid transport system substrate-binding protein | SAMN05444679_10631 | Not Available | Positive | 1886268 - 1887458 | 43381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
