Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l16p | SAMN05444679_10612 | Not Available | Positive | 1873132 - 1873548 | 15463.9 |
| lsu ribosomal protein l29p | SAMN05444679_10613 | Not Available | Positive | 1873564 - 1873821 | 9431.45 |
| ssu ribosomal protein s17p | SAMN05444679_10614 | Not Available | Positive | 1873831 - 1874100 | 10224.6 |
| peroxiredoxin | SAMN05444679_10615 | Not Available | Positive | 1874173 - 1874679 | 17551.9 |
| ribosomal protein s18 acetylase rimi | SAMN05444679_10616 | Not Available | Negative | 1874692 - 1875273 | 21019.1 |
| cytochrome b | SAMN05444679_10617 | Not Available | Negative | 1875270 - 1875983 | 25714.4 |
| cytochrome c556 | SAMN05444679_10618 | Not Available | Positive | 1876136 - 1876576 | 15488.6 |
| peroxiredoxin | SAMN05444679_10619 | Not Available | Negative | 1876604 - 1877101 | 17829.7 |
| protein of unknown function | SAMN05444679_10620 | Not Available | Positive | 1877115 - 1877819 | 24807.2 |
| hypothetical protein | SAMN05444679_10621 | Not Available | Positive | 1877819 - 1878349 | 18417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
