Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05444679_105325 | Not Available | Negative | 1859012 - 1859857 | 30043.5 |
| peptide/nickel transport system permease protein | SAMN05444679_105326 | Not Available | Negative | 1859854 - 1860828 | 34840.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_105327 | Not Available | Negative | 1860836 - 1862404 | 57313.9 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_105328 | Not Available | Negative | 1862464 - 1863255 | 28871.4 |
| hypothetical protein | SAMN05444679_105329 | Not Available | Positive | 1863530 - 1863811 | 10465.4 |
| hypothetical protein | SAMN05444679_105330 | Not Available | Positive | 1864105 - 1864233 | 4944.86 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_105331 | Not Available | Negative | 1864270 - 1864980 | 26404.6 |
| uncharacterized conserved protein, duf849 family | SAMN05444679_105332 | Not Available | Positive | 1865092 - 1866009 | 33317.3 |
| hpt domain-containing protein | SAMN05444679_105333 | Not Available | Positive | 1866045 - 1866206 | 5627.81 |
| elongation factor tu c-terminal domain-containing protein | SAMN05444679_1061 | Not Available | Positive | 1866207 - 1866307 | 3383.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
