Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | SAMN05444679_105315 | Not Available | Positive | 1847651 - 1848988 | 48130.9 |
| 4-aminobutyrate aminotransferase | SAMN05444679_105316 | Not Available | Negative | 1848985 - 1850259 | 44910.0 |
| ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonist | SAMN05444679_105317 | Not Available | Negative | 1850261 - 1851313 | 37971.5 |
| acetoin utilization deacetylase acuc | SAMN05444679_105318 | Not Available | Negative | 1851310 - 1852338 | 37113.0 |
| transcriptional regulator, gntr family | SAMN05444679_105319 | Not Available | Negative | 1852356 - 1853057 | 25904.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444679_105320 | Not Available | Negative | 1853090 - 1853971 | 31666.0 |
| acetoin utilization deacetylase acuc | SAMN05444679_105321 | Not Available | Negative | 1853971 - 1855029 | 38116.2 |
| 4-aminobutyrate---pyruvate transaminase | SAMN05444679_105322 | Not Available | Negative | 1855026 - 1856396 | 49023.7 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05444679_105323 | Not Available | Negative | 1856398 - 1857360 | 34337.6 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_105324 | Not Available | Negative | 1857360 - 1859015 | 58931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
