Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate-coa ligase | SAMN05444679_105305 | Not Available | Positive | 1837912 - 1839462 | 56177.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_105306 | Not Available | Positive | 1839459 - 1840277 | 30939.8 |
| branched-chain amino acid transport system substrate-binding protein | SAMN05444679_105307 | Not Available | Positive | 1840413 - 1841579 | 41014.5 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_105308 | Not Available | Positive | 1841600 - 1842472 | 31455.7 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_105309 | Not Available | Positive | 1842474 - 1843427 | 33175.8 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_105310 | Not Available | Positive | 1843424 - 1844170 | 26405.8 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_105311 | Not Available | Positive | 1844172 - 1844873 | 25381.1 |
| fic family protein | SAMN05444679_105312 | Not Available | Negative | 1844985 - 1845893 | 34582.5 |
| hypothetical protein | SAMN05444679_105313 | Not Available | Negative | 1846081 - 1846914 | 30393.5 |
| helix-turn-helix domain-containing protein | SAMN05444679_105314 | Not Available | Positive | 1847217 - 1847639 | 15508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
