Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_105295 | Not Available | Positive | 1827282 - 1827884 | 21201.2 |
| predicted metal-binding membrane protein | SAMN05444679_105296 | Not Available | Positive | 1827881 - 1828711 | 29770.3 |
| threonine/homoserine efflux transporter rhta | SAMN05444679_105297 | Not Available | Positive | 1828704 - 1829576 | 29329.7 |
| acyl dehydratase | SAMN05444679_105298 | Not Available | Negative | 1829560 - 1829997 | 16010.2 |
| benzoyl-coa oxygenase, component a | SAMN05444679_105299 | Not Available | Negative | 1830007 - 1831287 | 46527.4 |
| benzoyl-coa oxygenase, component b | SAMN05444679_105300 | Not Available | Negative | 1831410 - 1832837 | 53797.5 |
| 2,3-dihydro-2,3-dihydroxybenzoyl-coa ring cleavage enzyme | SAMN05444679_105301 | Not Available | Negative | 1832941 - 1834611 | 60782.1 |
| transcriptional regulator, xre family with shikimate kinase activity /shikimate kinase | SAMN05444679_105302 | Not Available | Negative | 1834748 - 1835677 | 33549.2 |
| protein of unknown function | SAMN05444679_105303 | Not Available | Positive | 1835837 - 1836304 | 16949.1 |
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | SAMN05444679_105304 | Not Available | Positive | 1836313 - 1837872 | 53467.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
