Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_101168 | Not Available | Positive | 151695 - 152642 | 33017.9 |
| pyridoxamine 5'-phosphate oxidase | SAMN05444679_101169 | Not Available | Negative | 152655 - 153320 | 25184.8 |
| molybdenum cofactor cytidylyltransferase | SAMN05444679_101170 | Not Available | Positive | 153343 - 153906 | 18984.9 |
| superoxide dismutase, cu-zn family | SAMN05444679_101171 | Not Available | Negative | 153893 - 154432 | 17902.1 |
| cation transport protein chac | SAMN05444679_101172 | Not Available | Negative | 154435 - 155109 | 25036.9 |
| ompa family protein | SAMN05444679_101173 | Not Available | Positive | 155209 - 155727 | 17713.5 |
| cupin domain-containing protein | SAMN05444679_101174 | Not Available | Negative | 155738 - 156124 | 13778.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_101175 | Not Available | Positive | 156241 - 157122 | 32290.4 |
| 6-phosphogluconate dehydratase | SAMN05444679_101176 | Not Available | Positive | 157208 - 159046 | 64373.4 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05444679_101177 | Not Available | Positive | 159037 - 159678 | 21979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
