Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | SAMN05444679_105285 | Not Available | Positive | 1819757 - 1820314 | 20629.6 |
| hypothetical protein | SAMN05444679_105286 | Not Available | Positive | 1820434 - 1820733 | 10327.1 |
| hypothetical protein | SAMN05444679_105287 | Not Available | Positive | 1820791 - 1821123 | 12112.3 |
| negative transcriptional regulator, paib family | SAMN05444679_105288 | Not Available | Positive | 1821215 - 1821865 | 23503.1 |
| hypothetical protein | SAMN05444679_105289 | Not Available | Negative | 1822154 - 1822726 | 19923.1 |
| nicotinamidase-related amidase | SAMN05444679_105290 | Not Available | Positive | 1822941 - 1823480 | 19764.3 |
| uncharacterized protein yhff | SAMN05444679_105291 | Not Available | Negative | 1823503 - 1823961 | 16758.7 |
| protein of unknown function | SAMN05444679_105292 | Not Available | Negative | 1824237 - 1825469 | 40956.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_105293 | Not Available | Negative | 1825651 - 1826451 | 27947.5 |
| gaf domain-containing protein | SAMN05444679_105294 | Not Available | Negative | 1826536 - 1827096 | 20491.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
