Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444679_105275 | Not Available | Negative | 1811738 - 1812433 | 23035.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_105276 | Not Available | Negative | 1812423 - 1813391 | 33867.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_105277 | Not Available | Negative | 1813421 - 1814353 | 33662.7 |
| transcriptional regulator, lysr family | SAMN05444679_105278 | Not Available | Positive | 1814482 - 1815393 | 32885.0 |
| grpb domain, predicted nucleotidyltransferase, upf0157 family | SAMN05444679_105279 | Not Available | Positive | 1815488 - 1816024 | 20703.7 |
| protein of unknown function | SAMN05444679_105280 | Not Available | Positive | 1816134 - 1816469 | 12368.0 |
| hypothetical protein | SAMN05444679_105281 | Not Available | Positive | 1816593 - 1816793 | 7261.89 |
| transporter, cpa2 family | SAMN05444679_105282 | Not Available | Positive | 1816917 - 1818164 | 43267.2 |
| carbonic anhydrase | SAMN05444679_105283 | Not Available | Negative | 1818237 - 1818995 | 27287.8 |
| putative acetyltransferase | SAMN05444679_105284 | Not Available | Positive | 1819234 - 1819719 | 18529.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
