Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05444679_105265 | Not Available | Negative | 1800341 - 1801654 | 46425.4 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_105266 | Not Available | Positive | 1801712 - 1802209 | 18954.0 |
| cardiolipin synthase | SAMN05444679_105267 | Not Available | Negative | 1802237 - 1803526 | 47681.6 |
| hypothetical protein | SAMN05444679_105268 | Not Available | Negative | 1803597 - 1804529 | 32019.1 |
| uncharacterized iron-regulated membrane protein | SAMN05444679_105269 | Not Available | Positive | 1804698 - 1805828 | 40857.1 |
| fe(3+) dicitrate transport protein | SAMN05444679_105270 | Not Available | Positive | 1805874 - 1808030 | 77817.0 |
| eama domain-containing membrane protein rard | SAMN05444679_105271 | Not Available | Negative | 1808033 - 1808938 | 32057.4 |
| predicted dienelactone hydrolase | SAMN05444679_105272 | Not Available | Positive | 1809073 - 1810098 | 36356.5 |
| hypothetical protein | SAMN05444679_105273 | Not Available | Positive | 1810157 - 1810534 | 13498.7 |
| l-alanine-dl-glutamate epimerase | SAMN05444679_105274 | Not Available | Negative | 1810553 - 1811719 | 43248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
