Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_105255 | Not Available | Positive | 1793874 - 1794101 | 8174.62 |
| hypothetical protein | SAMN05444679_105256 | Not Available | Negative | 1794229 - 1794909 | 24875.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_105257 | Not Available | Negative | 1795057 - 1795488 | 15522.8 |
| integral membrane protein, yjbe family | SAMN05444679_105258 | Not Available | Negative | 1795499 - 1796215 | 25121.8 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05444679_105259 | Not Available | Negative | 1796360 - 1797751 | 51624.3 |
| two-component system, ompr family, response regulator | SAMN05444679_105260 | Not Available | Negative | 1797738 - 1798412 | 25033.5 |
| hypothetical protein | SAMN05444679_105261 | Not Available | Negative | 1798483 - 1798797 | 11560.8 |
| hypothetical protein | SAMN05444679_105262 | Not Available | Negative | 1798900 - 1799067 | 5978.53 |
| hypothetical protein | SAMN05444679_105263 | Not Available | Positive | 1799341 - 1799829 | 14255.6 |
| putative acetyltransferase | SAMN05444679_105264 | Not Available | Positive | 1799905 - 1800360 | 17068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
