Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_105215 | Not Available | Negative | 1760778 - 1761755 | 34160.9 |
| putative membrane protein | SAMN05444679_105216 | Not Available | Positive | 1761818 - 1762315 | 17804.4 |
| transcriptional regulator, hxlr family | SAMN05444679_105217 | Not Available | Negative | 1762330 - 1762755 | 15617.1 |
| dihydrofolate reductase | SAMN05444679_105218 | Not Available | Positive | 1762848 - 1763438 | 21964.1 |
| hypothetical protein | SAMN05444679_105219 | Not Available | Negative | 1763426 - 1763593 | 5946.14 |
| hypothetical protein | SAMN05444679_105220 | Not Available | Positive | 1763669 - 1763866 | 7055.77 |
| hypothetical protein | SAMN05444679_105221 | Not Available | Negative | 1763847 - 1764587 | 27184.6 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05444679_105222 | Not Available | Negative | 1764697 - 1765911 | 40760.9 |
| acetoacetyl-coa synthetase | SAMN05444679_105223 | Not Available | Negative | 1765993 - 1768017 | 74268.5 |
| transcriptional regulator, tetr family | SAMN05444679_105224 | Not Available | Positive | 1768117 - 1768809 | 25925.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
