Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative regulatory protein, fmdb family | SAMN05444679_105205 | Not Available | Positive | 1752228 - 1752392 | 6180.34 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN05444679_105206 | Not Available | Positive | 1752485 - 1753144 | 24471.2 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_105207 | Not Available | Positive | 1753159 - 1754199 | 38028.9 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | SAMN05444679_105208 | Not Available | Negative | 1754214 - 1755791 | 57222.0 |
| hypothetical protein | SAMN05444679_105209 | Not Available | Negative | 1756070 - 1756477 | 14788.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_105210 | Not Available | Positive | 1756597 - 1757484 | 32731.0 |
| hypothetical protein | SAMN05444679_105211 | Not Available | Positive | 1757481 - 1757786 | 10950.4 |
| hypothetical protein | SAMN05444679_105212 | Not Available | Negative | 1757793 - 1758599 | 29800.5 |
| hypothetical protein | SAMN05444679_105213 | Not Available | Positive | 1758938 - 1759525 | 21175.4 |
| galactarate dehydratase /l-talarate dehydratase | SAMN05444679_105214 | Not Available | Negative | 1759547 - 1760737 | 43626.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
