Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN05444679_101158 | Not Available | Positive | 139396 - 140751 | 48445.8 |
| outer membrane protein | SAMN05444679_101159 | Not Available | Negative | 140758 - 142275 | 53406.5 |
| rhodanese-related sulfurtransferase | SAMN05444679_101160 | Not Available | Negative | 142298 - 142636 | 12267.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05444679_101161 | Not Available | Negative | 142648 - 143331 | 25101.7 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444679_101162 | Not Available | Negative | 143361 - 146591 | 117177.0 |
| rnd family efflux transporter, mfp subunit | SAMN05444679_101163 | Not Available | Negative | 146604 - 147764 | 40203.3 |
| transcriptional regulator, tetr family | SAMN05444679_101164 | Not Available | Negative | 147761 - 148441 | 25484.8 |
| peptide-methionine (s)-s-oxide reductase | SAMN05444679_101165 | Not Available | Positive | 148542 - 149096 | 20601.1 |
| hypothetical protein | SAMN05444679_101166 | Not Available | Positive | 149147 - 149488 | 11811.2 |
| iron complex outermembrane recepter protein | SAMN05444679_101167 | Not Available | Positive | 149570 - 151672 | 75189.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
