Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | SAMN05444679_105185 | Not Available | Positive | 1732946 - 1733812 | 31581.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_105186 | Not Available | Positive | 1733834 - 1734598 | 25832.0 |
| uncharacterized conserved protein, duf849 family | SAMN05444679_105187 | Not Available | Positive | 1734595 - 1735479 | 31834.8 |
| nadph:quinone reductase | SAMN05444679_105188 | Not Available | Positive | 1735483 - 1736481 | 34815.6 |
| hypothetical protein | SAMN05444679_105189 | Not Available | Positive | 1736494 - 1736853 | 13181.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_105190 | Not Available | Positive | 1736898 - 1737878 | 34028.4 |
| hypothetical protein | SAMN05444679_105191 | Not Available | Positive | 1737884 - 1739884 | 71821.6 |
| cupin domain protein | SAMN05444679_105192 | Not Available | Negative | 1739895 - 1740410 | 17845.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_105193 | Not Available | Negative | 1740407 - 1741156 | 25827.2 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05444679_105194 | Not Available | Positive | 1741248 - 1742672 | 51404.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
