Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444679_105175 | Not Available | Negative | 1721153 - 1722043 | 32212.2 |
| protein of unknown function | SAMN05444679_105176 | Not Available | Positive | 1722132 - 1722341 | 7888.61 |
| 5-oxoprolinase (atp-hydrolysing) | SAMN05444679_105177 | Not Available | Negative | 1722338 - 1725982 | 129193.0 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444679_105178 | Not Available | Negative | 1725979 - 1726923 | 34446.4 |
| trap transporter, dctm subunit | SAMN05444679_105179 | Not Available | Negative | 1726947 - 1728257 | 46866.2 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444679_105180 | Not Available | Negative | 1728273 - 1728896 | 21993.1 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444679_105181 | Not Available | Negative | 1728918 - 1729883 | 34518.1 |
| uncharacterized protein ycsi, upf0317 family | SAMN05444679_105182 | Not Available | Negative | 1729907 - 1730734 | 29519.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_105183 | Not Available | Negative | 1730831 - 1731736 | 33415.7 |
| transcriptional regulator, laci family | SAMN05444679_105184 | Not Available | Negative | 1731780 - 1732808 | 37124.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
