Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | SAMN05444679_105165 | Not Available | Positive | 1712549 - 1713076 | 19186.1 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444679_105166 | Not Available | Positive | 1713073 - 1714002 | 33975.2 |
| hypothetical protein | SAMN05444679_105167 | Not Available | Positive | 1714045 - 1715205 | 43162.8 |
| l-glutaminase | SAMN05444679_105168 | Not Available | Positive | 1715225 - 1716139 | 32406.1 |
| hypothetical protein | SAMN05444679_105169 | Not Available | Positive | 1716149 - 1716622 | 17444.5 |
| sugar phosphate permease | SAMN05444679_105170 | Not Available | Negative | 1716607 - 1717953 | 47852.6 |
| hypothetical protein | SAMN05444679_105171 | Not Available | Negative | 1717950 - 1719065 | 41033.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_105172 | Not Available | Negative | 1719100 - 1719900 | 28172.8 |
| conserved hypothetical protein, steroid delta-isomerase-related | SAMN05444679_105173 | Not Available | Negative | 1719908 - 1720414 | 18811.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_105174 | Not Available | Positive | 1720488 - 1721156 | 24305.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
