Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_105155 | Not Available | Negative | 1702373 - 1702546 | 6111.22 |
| calcineurin-like phosphoesterase | SAMN05444679_105156 | Not Available | Positive | 1702548 - 1703483 | 34894.8 |
| alkaline phosphatase d | SAMN05444679_105157 | Not Available | Negative | 1703490 - 1705037 | 56782.7 |
| putative cardiolipin synthase | SAMN05444679_105158 | Not Available | Negative | 1705046 - 1706620 | 57385.0 |
| spore maturation protein spma | SAMN05444679_105159 | Not Available | Positive | 1706682 - 1707911 | 42848.7 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444679_105160 | Not Available | Positive | 1708041 - 1708484 | 15457.2 |
| transcriptional regulator, gntr family | SAMN05444679_105161 | Not Available | Negative | 1708497 - 1709216 | 26180.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_105162 | Not Available | Positive | 1709342 - 1710325 | 33360.7 |
| hypothetical protein | SAMN05444679_105163 | Not Available | Positive | 1710339 - 1711091 | 24881.0 |
| cytosine/adenosine deaminase | SAMN05444679_105164 | Not Available | Positive | 1711111 - 1712517 | 49993.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
