Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system permease protein | SAMN05444679_105145 | Not Available | Negative | 1689038 - 1689901 | 30764.2 |
| nitt/taut family transport system substrate-binding protein | SAMN05444679_105146 | Not Available | Negative | 1689917 - 1690882 | 34007.2 |
| atp-dependent dna helicase recq | SAMN05444679_105147 | Not Available | Positive | 1691261 - 1693228 | 71215.6 |
| peptidase family s41 | SAMN05444679_105148 | Not Available | Negative | 1693225 - 1694772 | 52938.8 |
| aaa+-type atpase, spovk/ycf46/vps4 family | SAMN05444679_105149 | Not Available | Negative | 1694825 - 1697146 | 85460.1 |
| threonine dehydratase | SAMN05444679_105150 | Not Available | Positive | 1697268 - 1698467 | 42190.3 |
| hypothetical protein | SAMN05444679_105151 | Not Available | Positive | 1698548 - 1698700 | 5173.48 |
| phosphoenolpyruvate carboxykinase (gtp) | SAMN05444679_105152 | Not Available | Positive | 1698882 - 1700732 | 67608.5 |
| hypothetical protein | SAMN05444679_105153 | Not Available | Negative | 1700794 - 1701312 | 18604.6 |
| transcriptional regulator, lysr family | SAMN05444679_105154 | Not Available | Positive | 1701422 - 1702390 | 35664.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
