Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_105135 | Not Available | Negative | 1679253 - 1679867 | 21808.8 |
| amino acid abc transporter membrane protein, paat family | SAMN05444679_105136 | Not Available | Negative | 1679864 - 1680532 | 24027.3 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_105137 | Not Available | Negative | 1680545 - 1681297 | 27448.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_105138 | Not Available | Negative | 1681349 - 1682317 | 33586.6 |
| abc-type phosphate/phosphonate transport system, substrate-binding protein | SAMN05444679_105139 | Not Available | Negative | 1682317 - 1683123 | 28972.7 |
| ornithine cyclodeaminase | SAMN05444679_105140 | Not Available | Negative | 1683129 - 1684133 | 36819.7 |
| urocanate hydratase | SAMN05444679_105141 | Not Available | Negative | 1684138 - 1685862 | 62390.4 |
| histidine ammonia-lyase | SAMN05444679_105142 | Not Available | Negative | 1685899 - 1687449 | 53187.1 |
| gntr family transcriptional regulator, histidine utilization repressor | SAMN05444679_105143 | Not Available | Negative | 1687505 - 1688257 | 28025.6 |
| nitt/taut family transport system atp-binding protein | SAMN05444679_105144 | Not Available | Negative | 1688259 - 1689038 | 28902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
