Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_105125 | Not Available | Negative | 1666693 - 1667679 | 35704.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05444679_105126 | Not Available | Negative | 1667663 - 1669450 | 65692.9 |
| methionine synthase (b12-dependent) | SAMN05444679_105127 | Not Available | Negative | 1669450 - 1672164 | 100303.0 |
| uncharacterized membrane protein | SAMN05444679_105128 | Not Available | Negative | 1672321 - 1672758 | 15876.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_105129 | Not Available | Positive | 1672859 - 1673749 | 31829.5 |
| uncharacterized conserved protein yrai | SAMN05444679_105130 | Not Available | Negative | 1673754 - 1674599 | 30600.2 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05444679_105131 | Not Available | Negative | 1674716 - 1675762 | 37618.8 |
| n-formylglutamate deformylase | SAMN05444679_105132 | Not Available | Negative | 1675816 - 1676625 | 29572.9 |
| formimidoylglutamate deiminase | SAMN05444679_105133 | Not Available | Negative | 1676622 - 1678007 | 49001.2 |
| imidazolonepropionase | SAMN05444679_105134 | Not Available | Negative | 1678020 - 1679249 | 43150.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
