Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, lplt family, lysophospholipid transporter | SAMN05444679_10595 | Not Available | Positive | 1634220 - 1635524 | 46580.9 |
| eama-like transporter family protein | SAMN05444679_10596 | Not Available | Positive | 1635545 - 1636453 | 31819.4 |
| glutathione peroxidase | SAMN05444679_10597 | Not Available | Positive | 1636450 - 1636935 | 17550.1 |
| hypothetical protein | SAMN05444679_10598 | Not Available | Negative | 1636949 - 1637377 | 14691.8 |
| glycolate oxidase iron-sulfur subunit | SAMN05444679_10599 | Not Available | Negative | 1637464 - 1638693 | 44173.6 |
| glycolate oxidase fad binding subunit | SAMN05444679_105100 | Not Available | Negative | 1638705 - 1639802 | 38808.5 |
| sugar lactone lactonase yvre | SAMN05444679_105101 | Not Available | Negative | 1639832 - 1640752 | 33900.8 |
| ammonium transporter | SAMN05444679_105102 | Not Available | Negative | 1640851 - 1642389 | 52399.3 |
| nitrogen regulatory protein p-ii family | SAMN05444679_105103 | Not Available | Negative | 1642415 - 1642753 | 12302.0 |
| conserved hypothetical protein | SAMN05444679_105104 | Not Available | Negative | 1642798 - 1643607 | 28838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
