Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(i)-responsive transcriptional regulator | SAMN05444679_101148 | Not Available | Negative | 128287 - 128766 | 17790.4 |
| cu+-exporting atpase | SAMN05444679_101149 | Not Available | Negative | 128766 - 131000 | 77432.2 |
| cupin superfamily protein | SAMN05444679_101150 | Not Available | Positive | 131201 - 132169 | 36513.6 |
| cytochrome c, mono-and diheme variants | SAMN05444679_101151 | Not Available | Negative | 132180 - 133442 | 44796.3 |
| cytochrome c553 | SAMN05444679_101152 | Not Available | Negative | 133445 - 134161 | 25369.7 |
| uncharacterized membrane protein | SAMN05444679_101153 | Not Available | Positive | 134263 - 134913 | 23776.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444679_101154 | Not Available | Negative | 134910 - 135866 | 33562.9 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN05444679_101155 | Not Available | Negative | 135863 - 136360 | 17473.8 |
| dna-3-methyladenine glycosylase ii | SAMN05444679_101156 | Not Available | Negative | 136357 - 137892 | 54472.4 |
| phosphomannomutase | SAMN05444679_101157 | Not Available | Positive | 138002 - 139384 | 48563.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
