Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | SAMN05444679_10585 | Not Available | Positive | 1624962 - 1626419 | 52216.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN05444679_10586 | Not Available | Positive | 1626422 - 1627297 | 32483.6 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | SAMN05444679_10587 | Not Available | Positive | 1627309 - 1627713 | 14933.0 |
| 2-oxohept-3-enedioate hydratase | SAMN05444679_10588 | Not Available | Positive | 1627723 - 1628526 | 29405.2 |
| 2,4-dihydroxyhept-2-enedioate aldolase | SAMN05444679_10589 | Not Available | Positive | 1628536 - 1629345 | 28373.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10590 | Not Available | Positive | 1629450 - 1630439 | 34396.5 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_10591 | Not Available | Positive | 1630459 - 1631247 | 28596.3 |
| ketopantoate reductase | SAMN05444679_10592 | Not Available | Positive | 1631251 - 1632228 | 34111.6 |
| hypothetical protein | SAMN05444679_10593 | Not Available | Negative | 1632243 - 1632965 | 25870.0 |
| alanine racemase | SAMN05444679_10594 | Not Available | Negative | 1632962 - 1634137 | 42739.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
