Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_10565 | Not Available | Positive | 1606854 - 1607837 | 35938.5 |
| peptidase family m48 | SAMN05444679_10566 | Not Available | Negative | 1607850 - 1608716 | 30755.1 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN05444679_10567 | Not Available | Positive | 1608719 - 1610050 | 47111.4 |
| arc-like dna binding domain-containing protein | SAMN05444679_10568 | Not Available | Positive | 1610075 - 1610347 | 9956.9 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN05444679_10569 | Not Available | Positive | 1610344 - 1610787 | 15875.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN05444679_10570 | Not Available | Positive | 1610870 - 1612063 | 41248.9 |
| beta-ketoacyl synthase, n-terminal domain | SAMN05444679_10571 | Not Available | Positive | 1612060 - 1612863 | 27549.9 |
| dehydrogenase (flavoprotein) | SAMN05444679_10572 | Not Available | Positive | 1612874 - 1614502 | 61774.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444679_10573 | Not Available | Positive | 1614584 - 1615297 | 26039.7 |
| two-component system, ompr family, sensor histidine kinase rstb | SAMN05444679_10574 | Not Available | Positive | 1615309 - 1616493 | 42841.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
