Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_10535 | Not Available | Negative | 1577809 - 1578960 | 39514.8 |
| penicillin-binding protein 2 | SAMN05444679_10536 | Not Available | Negative | 1579084 - 1581057 | 71744.8 |
| rod shape-determining protein mred | SAMN05444679_10537 | Not Available | Negative | 1581114 - 1581635 | 19119.3 |
| rod shape-determining protein mrec | SAMN05444679_10538 | Not Available | Negative | 1581632 - 1582594 | 33895.8 |
| rod shape-determining protein mreb | SAMN05444679_10539 | Not Available | Negative | 1582669 - 1583712 | 36821.9 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN05444679_10540 | Not Available | Positive | 1583917 - 1584216 | 10831.9 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN05444679_10541 | Not Available | Positive | 1584213 - 1585703 | 52374.1 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN05444679_10542 | Not Available | Positive | 1585705 - 1587183 | 53872.9 |
| hypothetical protein | SAMN05444679_10543 | Not Available | Negative | 1587231 - 1587431 | 7816.07 |
| protein of unknown function | SAMN05444679_10544 | Not Available | Negative | 1588090 - 1588752 | 24742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
