Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN05444679_10525 | Not Available | Positive | 1566426 - 1568051 | 59626.6 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444679_10526 | Not Available | Negative | 1568182 - 1569249 | 38089.1 |
| sarcosine oxidase subunit beta | SAMN05444679_10527 | Not Available | Negative | 1569284 - 1570426 | 40338.4 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN05444679_10528 | Not Available | Negative | 1570423 - 1571820 | 49240.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN05444679_10529 | Not Available | Negative | 1571817 - 1572119 | 10349.5 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_10530 | Not Available | Negative | 1572116 - 1572910 | 28550.8 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_10531 | Not Available | Negative | 1572915 - 1573763 | 30840.8 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444679_10532 | Not Available | Negative | 1573760 - 1574842 | 39245.5 |
| transcriptional regulator, iclr family | SAMN05444679_10533 | Not Available | Positive | 1575036 - 1575884 | 30019.3 |
| aldehyde dehydrogenase (nad+) | SAMN05444679_10534 | Not Available | Positive | 1575990 - 1577558 | 54783.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
