Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat protein secretion system quality control protein tatd (dnase activity) | SAMN05444679_10515 | Not Available | Negative | 1558319 - 1559188 | 31805.0 |
| carboxymethylenebutenolidase | SAMN05444679_10516 | Not Available | Negative | 1559217 - 1559900 | 24065.5 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444679_10517 | Not Available | Negative | 1559903 - 1560523 | 22732.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_10518 | Not Available | Positive | 1560595 - 1561341 | 25685.8 |
| multiple antibiotic resistance protein | SAMN05444679_10519 | Not Available | Positive | 1561341 - 1561997 | 22945.9 |
| hypothetical protein | SAMN05444679_10520 | Not Available | Negative | 1561994 - 1562458 | 16398.8 |
| cholesterol transport system auxiliary component | SAMN05444679_10521 | Not Available | Negative | 1562474 - 1563154 | 23864.6 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05444679_10522 | Not Available | Negative | 1563166 - 1564152 | 34666.1 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05444679_10523 | Not Available | Negative | 1564158 - 1565003 | 30260.9 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05444679_10524 | Not Available | Negative | 1565059 - 1566228 | 42052.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
