Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05444679_1055 | Not Available | Negative | 1550009 - 1551178 | 42146.1 |
| hypothetical protein | SAMN05444679_1056 | Not Available | Negative | 1551201 - 1551833 | 22108.6 |
| (2fe-2s) ferredoxin | SAMN05444679_1057 | Not Available | Negative | 1551833 - 1552186 | 13003.4 |
| vanz like family protein | SAMN05444679_1058 | Not Available | Negative | 1552238 - 1553350 | 39894.2 |
| putative membrane protein | SAMN05444679_1059 | Not Available | Negative | 1553356 - 1553784 | 16110.5 |
| porphobilinogen synthase | SAMN05444679_10510 | Not Available | Positive | 1554105 - 1555109 | 36243.7 |
| mg2+ and co2+ transporter cora | SAMN05444679_10511 | Not Available | Positive | 1555127 - 1556263 | 42104.0 |
| hypothetical protein | SAMN05444679_10512 | Not Available | Negative | 1556320 - 1556688 | 12296.3 |
| hypothetical protein | SAMN05444679_10513 | Not Available | Negative | 1556889 - 1557242 | 12185.3 |
| transcriptional regulator, lysr family | SAMN05444679_10514 | Not Available | Positive | 1557350 - 1558309 | 35335.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
