Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized copper-binding protein, cupredoxin-like subfamily | SAMN05444679_101138 | Not Available | Negative | 120539 - 121024 | 17201.9 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444679_101139 | Not Available | Negative | 121058 - 122470 | 52005.7 |
| outer membrane protein tolc | SAMN05444679_101140 | Not Available | Negative | 122495 - 123916 | 50980.4 |
| hypothetical protein | SAMN05444679_101141 | Not Available | Negative | 123913 - 124239 | 11398.4 |
| hypothetical protein | SAMN05444679_101142 | Not Available | Negative | 124359 - 124769 | 14451.1 |
| cu and ag efflux protein cusf | SAMN05444679_101143 | Not Available | Negative | 124828 - 125199 | 13314.3 |
| uncharacterized conserved protein | SAMN05444679_101144 | Not Available | Negative | 125196 - 125666 | 16717.2 |
| atpase, p-type (transporting), had superfamily, subfamily ic | SAMN05444679_101145 | Not Available | Negative | 125707 - 126276 | 19419.8 |
| cu(i)-responsive transcriptional regulator | SAMN05444679_101146 | Not Available | Negative | 126582 - 127046 | 17414.8 |
| hypothetical protein | SAMN05444679_101147 | Not Available | Negative | 127278 - 128198 | 33011.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
