Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_104289 | Not Available | Negative | 1530199 - 1531131 | 34517.3 |
| hypothetical protein | SAMN05444679_104290 | Not Available | Negative | 1531196 - 1532065 | 32868.4 |
| udp-n-acetylglucosamine pyrophosphorylase /glucosamine-1-phosphate n-acetyltransferase | SAMN05444679_104291 | Not Available | Positive | 1532085 - 1533527 | 49785.4 |
| dna-binding transcriptional regulator, lrp family | SAMN05444679_104292 | Not Available | Negative | 1533481 - 1533996 | 18816.5 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN05444679_104293 | Not Available | Positive | 1534136 - 1536016 | 67582.0 |
| hypothetical protein | SAMN05444679_104294 | Not Available | Positive | 1536290 - 1536529 | 8520.41 |
| hypothetical protein | SAMN05444679_104295 | Not Available | Positive | 1536648 - 1536953 | 10995.4 |
| regulatory helix-turn-helix protein, lysr family | SAMN05444679_104296 | Not Available | Negative | 1536918 - 1537388 | 17271.9 |
| transcriptional regulator, iclr family | SAMN05444679_104297 | Not Available | Negative | 1537566 - 1538378 | 29101.3 |
| fumarylacetoacetate (faa) hydrolase | SAMN05444679_104298 | Not Available | Positive | 1538480 - 1539460 | 35777.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
